Help

Data and code

Please visit Zenodo at DOI

Submit your sequences for prediction

You can submit one or multiple sequences (up to 100) by either copying and pasting them into the text box or uploading a file. In both cases, the sequences should be in FASTA format.

Submit Page Screenshot

FASTA format overview: (1) Each sequence begins with a header line, which starts with > followed by a unique ID (e.g., >Sequence1). (2) The lines following the header contain the sequence in a single-letter amino acid code. The sequence can be split across multiple lines. (3) Each new sequence should begin with its own header line.

Check your results

If you have saved your Job ID, you can retrieve your results for up to 4 weeks by entering it into the text box on the Job page.

Job Page Screenshot

If you submitted multiple sequences, a table displaying your results will be provided.

Job Page Screenshot

You can download individual results or all results, or view the predictions by selecting the appropriate button. An example prediction results page:

Job Page Screenshot

The MemMoRF box is red if the predicted region is shorter than 5 amino acids, indicating that shorter predictions are more likely to contain a higher number of false positives.

Look up human proteins

You can search for human proteins using various identifiers, including UniProt accession numbers (ACC), entry names, and gene names. The search is case-insensitive.

Search Human Page Screenshot

Contact

hegedus.tamas@hegelab.org